Rules of Protein-DNA Recognition: Computational and Experimental Advances
Videos from CMO Workshop
Wilma Olson, Rutgers University
Monday Jun 22, 2015 09:00 - 09:30
DNA topology confers sequence specificity to nonspecific architectural proteins
Robert Kaptein, Utrecht University + Bijvoet Center for Biomolecular Research
Monday Jun 22, 2015 09:30 - 09:58
DNA recognition and target location by the E. coli Lac Repressor
Francisco Melo, Pontifical Catholic University of Chile
Monday Jun 22, 2015 10:00 - 10:18
Development of new structural bioinformatics tools to advance our understanding of protein-DNA recognition
Héctor Viadiu, Universidad Nacional Autónoma de México
Monday Jun 22, 2015 11:30 - 12:02
Target gene specificity in the p53 family of transcription factors
Trevor Siggers, Boston University
Monday Jun 22, 2015 15:00 - 15:25
Adaptation and Allostery
Sebastiaan Meijsing, Max Planck Institute for Molecular Genetics
Monday Jun 22, 2015 15:30 - 15:58
How do transcriptional factors "know" where to go in the genome?
Charles Vinson, National Institutes of Health
Monday Jun 22, 2015 16:00 - 16:24
The ETS-CRE 16-mer (CCGGAAGTGACGTCAC) on microarrays
Tom Tullius, Boston University
Monday Jun 22, 2015 17:30 - 17:54
Nucleotide-resolution structural maps of DNA and DNA-protein complexes, in vitro and in vivo
Gary Stormo, Washington University in St. Louis
Tuesday Jun 23, 2015 09:00 - 09:32
New methods for determining specificity and cooperativity
Matt Weirauch, Cincinnati Children's Hospital
Tuesday Jun 23, 2015 09:30 - 09:48
Approaches for Understanding Combinatoric Transcription Factor Interactions
Marcus Noyes, Princeton University
Tuesday Jun 23, 2015 11:30 - 11:56
Advances in the omega-based B1H system for the comparative analysis of protein-DNA interactions
Mona Singh, Princeton University
Tuesday Jun 23, 2015 12:00 - 12:30
Explorring variation in Cys2His2 transcription factors
Polly Fordyce, Stanford University
Tuesday Jun 23, 2015 17:30 - 17:56
Developing and deploying microfluidic tools for understanding transcription factor specificities
Yaron Orenstein, Ben-Gurion University
Wednesday Jun 24, 2015 09:30 - 09:53
Computational inference of binding site models from high-throughput SELEX data
Chaitanya Rastogi, Columbia University
Wednesday Jun 24, 2015 11:00 - 11:11
Methods for Inferring Transcription Factor Specificity from SELEX-seq Data
Jeff Vierstra, University of Washington
Wednesday Jun 24, 2015 11:40 - 11:59
Zhiping Weng, University of Massachusetts
Thursday Jun 25, 2015 09:00 - 09:29
Predicting Transcription Factor Binding Sites by Combining Chromatin and Sequence Features
John Stamatoyannopoulos, University of Washington
Thursday Jun 25, 2015 09:30 - 09:55
Decoding TF Occupancy and Function
Roger Pique-Regi, Wayne State University
Thursday Jun 25, 2015 11:30 - 11:58
Identifying genetic variants and cellular environments affecting regulation of gene transcription
Alexandre Morozov, Rutgers University
Thursday Jun 25, 2015 12:00 - 12:26
Genome-wide profiling of chromatin structure and accessibility in D. Melanogaster
Bill Noble, University of Washington
Thursday Jun 25, 2015 12:30 - 12:56
Gene regulation in 3D
Wyeth Wasserman, University of British Columbia
Thursday Jun 25, 2015 15:00 - 15:28
Detection of altered TFBS in applied genome analysis
Barak Cohen, Washington University
Thursday Jun 25, 2015 16:00 - 16:26
Why don't transcription factors get lost? Specificity and cis-regulatory interactions in large genomes
Mark Biggin, Lawrence Berkeley National Laboratory
Thursday Jun 25, 2015 17:00 - 17:26
Protein/DNA interactions in vivo: Predicting DNA occupancy and function
